Hi,
ofxSerial I'm not sure about, that's not being included with the original project.
ofxAutoReloadedShader, check that you are running the latest version, not the 0.8.4 version as stated in the setup instructions for 0.8.4, as that has a fix for compiling in 0.9: https://github.com/andreasmuller/ofxAutoReloadedShader
You can just replace ofxAutoReloadedShader with an ofShader, you'll need to change the include path to something like this though where you see it, it'll be "Shaders/Common/etcetc" and should be:
#pragma include "../../Common/ShaderHelpers.glslinc"